U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

EEF1A1 eukaryotic translation elongation factor 1 alpha 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 494136, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
EEF1A1provided by VGNC
Official Full Name
eukaryotic translation elongation factor 1 alpha 1provided by VGNC
Primary source
VGNC:VGNC:11066
Locus tag
CK820_G0000969
See related
Ensembl:ENSPTRG00000018347
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (85460464..85464906, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (85457169..85463216, complement)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene cyclic GMP-AMP synthase Neighboring gene U6 spliceosomal RNA Neighboring gene mitochondrial tRNA translation optimization 1 Neighboring gene solute carrier family 17 member 5 Neighboring gene small ribosomal subunit protein eS27-like Neighboring gene uncharacterized LOC107975199

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Inferring the mode of speciation from genomic data: a study of the great apes. Osada N, et al. Genetics, 2005 Jan. PMID 15677748, Free PMC Article
  2. Mapping of chimpanzee full-length cDNAs onto the human genome unveils large potential divergence of the transcriptome. Sakate R, et al. Gene, 2007 Sep 1. PMID 17574350
  3. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
elongation factor 1-alpha 1
Names
EF-1-alpha-1
EF-Tu
eEF1A-1
elongation factor Tu
eukaryotic elongation factor 1 A-1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001009165.1 → NP_001009165.1  elongation factor 1-alpha 1

    See identical proteins and their annotated locations for NP_001009165.1

    Status: PROVISIONAL

    Source sequence(s)
    AB188275
    UniProtKB/Swiss-Prot
    Q5R1X2
    UniProtKB/TrEMBL
    A0A2J8PVY3, A0A663DJ63, G2HFA2, G2HFI3, G2HJQ4
    Related
    ENSPTRP00000045593.3, ENSPTRT00000048233.4
    Conserved Domains (1) summary
    PTZ00141
    Location:1 → 460
    PTZ00141; elongation factor 1- alpha; Provisional

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    85460464..85464906 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054685529.2 → XP_054541504.1  elongation factor 1-alpha 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5R1X2
    UniProtKB/TrEMBL
    A0A2J8PVY3, A0A663DJ63, G2HFA2

  2. XM_063812010.1 → XP_063668080.1  elongation factor 1-alpha 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5R1X2
    UniProtKB/TrEMBL
    A0A2J8PVY3, A0A663DJ63, G2HFA2

  3. XM_063812011.1 → XP_063668081.1  elongation factor 1-alpha 1 isoform X1

    UniProtKB/Swiss-Prot
    Q5R1X2
    UniProtKB/TrEMBL
    A0A2J8PVY3, A0A663DJ63, G2HFA2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5R1X2.1 GenPept UniProtKB/Swiss-Prot:Q5R1X2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous