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PVX_111105 phosphatidyl inositol glycan, class A, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5471432, updated on 17-May-2024

Summary

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Gene symbol
PVX_111105
Gene description
phosphatidyl inositol glycan, class A, putative
Primary source
PlasmoDB:PVX_111105
Locus tag
PVX_111105
Gene type
protein coding
RNA name
phosphatidyl inositol glycan, class A, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 6
Exon count:
6
Sequence:
Chromosome: 6; NC_009911.1 (648121..650247)

Chromosome 6 - NC_009911.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009911.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: 650171-650196 rpt_type = tandem , rpt_unit_seq = t , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidyl inositol glycan, class A, putative
XP_001608446.1
  • encoded by transcript PVX_111105A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009911.1 Reference assembly

    Range
    648121..650247
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001608396.1 → XP_001608446.1  phosphatidyl inositol glycan, class A, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001608446.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9SES3, A0A0J9SZ53, A0A0J9TG05, A0A0J9TY87, A0A1G4GUJ0, A5KDX3
    Conserved Domains (2) summary
    cd03796
    Location:13 → 409
    GT1_PIG-A_like; This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate ...
    COG0438
    Location:14 → 381
    RfaB; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
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