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PVX_097790 3-methyl-2-oxobutanoate dehydrogenase (lipoamide), putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5472474, updated on 11-Apr-2024

Summary

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Gene symbol
PVX_097790
Gene description
3-methyl-2-oxobutanoate dehydrogenase (lipoamide), putative
Locus tag
PVX_097790
Gene type
protein coding
RNA name
3-methyl-2-oxobutanoate dehydrogenase (lipoamide), putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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See PVX_097790 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
1
Sequence:
Chromosome: 10; NC_009915.1 (1161417..1162436, complement)

Chromosome 10 - NC_009915.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein, conserved Neighboring gene hypothetical protein Neighboring gene ATP-dependent helicase, putative Neighboring gene hypothetical protein, conserved Neighboring gene ATP-dependent helicase, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009915.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: c1161633-1161553 rpt_type = tandem , rpt_unit_seq = caaag , satellite = microsatellite
  • Loc: c1162243-1162212 rpt_type = tandem , rpt_unit_seq = ta , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in branched-chain amino acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to nutrient IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-methyl-2-oxobutanoate dehydrogenase (lipoamide), putative
XP_001613218.1
  • encoded by transcript PVX_097790A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009915.1 Reference assembly

    Range
    1161417..1162436 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001613168.1 → XP_001613218.1  3-methyl-2-oxobutanoate dehydrogenase (lipoamide), putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001613218.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9SW71, A0A0J9TCM0, A0A0J9U2R8, A0A0J9V1Z7, A0A1G4GZ79, A5KAX4
    Conserved Domains (1) summary
    PTZ00182
    Location:1 → 337
    PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional
Nucleotide Protein
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