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PVX_080285 vacuolar ATP synthetase, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5473037, updated on 16-Nov-2023

Summary

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Gene symbol
PVX_080285
Gene description
vacuolar ATP synthetase, putative
Locus tag
PVX_080285
Gene type
protein coding
RNA name
vacuolar ATP synthetase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 10
Exon count:
5
Sequence:
Chromosome: 10; NC_009915.1 (549593..551405)

Chromosome 10 - NC_009915.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S24, putative Neighboring gene cytochrome c oxidase assembly protein (heme A: farnesyltransferase), putative Neighboring gene 50S ribosomal subunit protein L14, putative Neighboring gene hypothetical protein, conserved

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009915.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: 549718-549753 rpt_type = tandem , rpt_unit_seq = catata , satellite = microsatellite
  • Loc: 550063-550084 rpt_type = tandem , rpt_unit_seq = a , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proton-transporting V-type ATPase, V0 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar ATP synthetase, putative
XP_001613765.1
  • encoded by transcript PVX_080285A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009915.1 Reference assembly

    Range
    549593..551405
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001613715.1 → XP_001613765.1  vacuolar ATP synthetase, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001613765.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9SB55, A0A0J9SVV5, A0A0J9TC91, A0A0J9TUY5, A0A1G4GYL3, A0A564ZVY4, A5K9G6
    Conserved Domains (2) summary
    TIGR01100
    Location:10 → 117
    V_ATP_synt_C; vacuolar ATP synthase 16 kDa proteolipid subunit
    pfam00137
    Location:91 → 152
    ATP-synt_C; ATP synthase subunit C
Nucleotide Protein
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