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PVX_100900 HD domain containing protein [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5473207, updated on 16-Nov-2023

Summary

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Gene symbol
PVX_100900
Gene description
HD domain containing protein
Locus tag
PVX_100900
Gene type
protein coding
RNA name
HD domain containing protein
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 14
Exon count:
1
Sequence:
Chromosome: 14; NC_009919.1 (2468053..2470443, complement)

Chromosome 14 - NC_009919.1Genomic Context describing neighboring genes Neighboring gene long-chain-fatty-acid--CoA ligase, putative Neighboring gene serine/threonine-protein kinase 2, putative Neighboring gene 50S ribosomal protein L23, putative Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009919.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dGTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dGTP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
HD domain containing protein
XP_001613926.1
  • encoded by transcript PVX_100900A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009919.1 Reference assembly

    Range
    2468053..2470443 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001613876.1 → XP_001613926.1  HD domain containing protein [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001613926.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9SPB5, A0A0J9T490, A0A0J9TPR9, A0A1G4H5R6, A5K8Q3
    Conserved Domains (2) summary
    smart00471
    Location:379 → 540
    HDc; Metal dependent phosphohydrolases with conserved 'HD' motif
    COG1078
    Location:333 → 735
    YdhJ; HD superfamily phosphohydrolase [General function prediction only]
Nucleotide Protein
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