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PVX_083005 aconitate hydratase I, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5473485, updated on 16-Nov-2023

Summary

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Gene symbol
PVX_083005
Gene description
aconitate hydratase I, putative
Locus tag
PVX_083005
Gene type
protein coding
RNA name
aconitate hydratase I, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 12
Exon count:
1
Sequence:
Chromosome: 12; NC_009917.1 (519646..522369, complement)

Chromosome 12 - NC_009917.1Genomic Context describing neighboring genes Neighboring gene casein kinase II beta chain, putative Neighboring gene hsp70 interacting protein, putative Neighboring gene hypothetical protein Neighboring gene 40S ribosomal protein S6, putative Neighboring gene vacuolar ATP synthase subunit D, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009917.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: c520304-520155 rpt_type = tandem , rpt_unit_seq = catata , satellite = microsatellite
  • Loc: c520335-520304 rpt_type = tandem , rpt_unit_seq = a , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aconitate hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in citrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aconitate hydratase I, putative
XP_001614200.1
  • encoded by transcript PVX_083005A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009917.1 Reference assembly

    Range
    519646..522369 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001614150.1 → XP_001614200.1  aconitate hydratase I, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001614200.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9STP4, A0A0J9T837, A0A0J9V086, A0A0J9WBY3, A0A1G4H0X2, A5K859
    Conserved Domains (3) summary
    cd01586
    Location:97 → 580
    AcnA_IRP; Aconitase A catalytic domain
    cd01580
    Location:683 → 852
    AcnA_IRP_Swivel; Aconitase A swivel domain. This is the major form of the TCA cycle enzyme aconitate hydratase, also known as aconitase and citrate hydro-lyase. It includes bacterial and archaeal aconitase A, and the eukaryotic cytosolic form of aconitase. This group ...
    PTZ00092
    Location:7 → 907
    PTZ00092; aconitate hydratase-like protein; Provisional
Nucleotide Protein
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