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PVX_094895 phospholipase C-like, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5473735, updated on 16-Nov-2023

Summary

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Gene symbol
PVX_094895
Gene description
phospholipase C-like, putative
Locus tag
PVX_094895
Gene type
protein coding
RNA name
phospholipase C-like, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 8
Exon count:
4
Sequence:
Chromosome: 8; NC_009913.1 (615420..620851)

Chromosome 8 - NC_009913.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009913.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: 616937-616967 rpt_type = tandem , rpt_unit_seq = a , satellite = microsatellite
  • Loc: 620368-620401 rpt_type = tandem , rpt_unit_seq = ttttta , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in maintenance of protein location in cell cortex IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell cortex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase C-like, putative
XP_001614446.1
  • encoded by transcript PVX_094895A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009913.1 Reference assembly

    Range
    615420..620851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001614396.1 → XP_001614446.1  phospholipase C-like, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001614446.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9TD88, A0A0J9TWQ7, A0A1G4HBK5, A5K7G0
    Conserved Domains (4) summary
    cd00275
    Location:1325 → 1427
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    pfam00387
    Location:1025 → 1131
    PI-PLC-Y; Phosphatidylinositol-specific phospholipase C, Y domain
    pfam12814
    Location:103 → 220
    Mcp5_PH; Meiotic cell cortex C-terminal pleckstrin homology
    cl14615
    Location:641 → 790
    PI-PLCc_GDPD_SF; Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily
Nucleotide Protein
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