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PVX_113530 uroporphyrinogen decarboxylase, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5475396, updated on 16-Nov-2023

Summary

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Gene symbol
PVX_113530
Gene description
uroporphyrinogen decarboxylase, putative
Locus tag
PVX_113530
Gene type
protein coding
RNA name
uroporphyrinogen decarboxylase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 11
Exon count:
2
Sequence:
Chromosome: 11; NC_009916.1 (1729848..1731229, complement)

Chromosome 11 - NC_009916.1Genomic Context describing neighboring genes Neighboring gene para-hydroxybenzoate--polyprenyltransferase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene MYND finger protein, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009916.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: c1731021-1730926 rpt_type = tandem , rpt_unit_seq = tcg , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables uroporphyrinogen decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heme biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uroporphyrinogen decarboxylase, putative
XP_001616097.1
  • encoded by transcript PVX_113530A; Apicoplast targeted protein. Curated by Stuart Ralph, Walter and Eliza Hall Institute of Medical Research, Australia.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009916.1 Reference assembly

    Range
    1729848..1731229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001616047.1 → XP_001616097.1  uroporphyrinogen decarboxylase, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001616097.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9SBV0, A0A0J9TC44, A0A0J9VGJ3, A0A0J9WCF6, A0A1G4H0E6, A0A1G4HG33, A5K1S0
    Conserved Domains (1) summary
    cd00717
    Location:76 → 409
    URO-D; Uroporphyrinogen decarboxylase (URO-D) is a dimeric cytosolic enzyme that decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, without requiring any prosthetic groups or cofactors. This reaction ...
Nucleotide Protein
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