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PVX_113675 transketolase, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5475425, updated on 16-Nov-2023

Summary

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Gene symbol
PVX_113675
Gene description
transketolase, putative
Locus tag
PVX_113675
Gene type
protein coding
RNA name
transketolase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 11
Exon count:
3
Sequence:
Chromosome: 11; NC_009916.1 (1589156..1592957, complement)

Chromosome 11 - NC_009916.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene trancription factor, putative Neighboring gene hypothetical protein Neighboring gene histone H3, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009916.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: c1589347-1589208 rpt_type = tandem , rpt_unit_seq = cgatg , satellite = microsatellite
  • Loc: c1590692-1590665 rpt_type = tandem , rpt_unit_seq = a , satellite = microsatellite
  • Loc: c1591861-1591734 rpt_type = tandem , rpt_unit_seq = ccg , satellite = microsatellite
  • Loc: c1592468-1592352 rpt_type = tandem , rpt_unit_seq = ta , satellite = microsatellite
  • Loc: c1592573-1592470 rpt_type = tandem , rpt_unit_seq = catata , satellite = microsatellite
  • Loc: c1592758-1592716 rpt_type = tandem , rpt_unit_seq = ta , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transketolase, putative
XP_001616126.1
  • encoded by transcript PVX_113675A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009916.1 Reference assembly

    Range
    1589156..1592957 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001616076.1 → XP_001616126.1  transketolase, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001616126.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9TB25, A0A0J9V0W7, A0A0J9VGG3, A0A0J9WCI4, A0A1G4HFP6, A5K1U9
    Conserved Domains (1) summary
    PTZ00089
    Location:1 → 668
    PTZ00089; transketolase; Provisional
Nucleotide Protein
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