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PVX_122890 3',5'-cyclic-nucleotide phosphodiesterase, putative [ Plasmodium vivax (malaria parasite P. vivax) ]

Gene ID: 5476450, updated on 16-Nov-2023

Summary

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Gene symbol
PVX_122890
Gene description
3',5'-cyclic-nucleotide phosphodiesterase, putative
Locus tag
PVX_122890
Gene type
protein coding
RNA name
3',5'-cyclic-nucleotide phosphodiesterase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium vivax (strain: Salvador I)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Plasmodium)
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Genomic context

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Location:
chromosome: 14
Exon count:
9
Sequence:
Chromosome: 14; NC_009919.1 (967246..971025)

Chromosome 14 - NC_009919.1Genomic Context describing neighboring genes Neighboring gene DHHC zinc finger domain containing protein Neighboring gene 3',5'-cyclic-nucleotide phosphodiesterase, putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009919.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the neglected human malaria parasite Plasmodium vivax. Carlton JM, et al. Nature, 2008 Oct 9. PMID 18843361, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Repeated regions

  • Loc: 968373-968396 rpt_type = tandem , rpt_unit_seq = t , satellite = microsatellite
  • Loc: 968581-968600 rpt_type = tandem , rpt_unit_seq = a , satellite = microsatellite
  • Loc: 970031-970055 rpt_type = tandem , rpt_unit_seq = t , satellite = microsatellite

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-nucleotide phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3',5'-cyclic-nucleotide phosphodiesterase, putative
XP_001617141.1
  • encoded by transcript PVX_122890A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009919.1 Reference assembly

    Range
    967246..971025
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001617091.1 → XP_001617141.1  3',5'-cyclic-nucleotide phosphodiesterase, putative [Plasmodium vivax]

    See identical proteins and their annotated locations for XP_001617141.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J9S7I8, A0A0J9SQP5, A0A0J9T5X3, A0A0J9TN25, A0A1G4H4Q0, A5JZK3
    Conserved Domains (1) summary
    pfam00233
    Location:500 → 735
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein
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