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sstr3 somatostatin receptor 3 [ Danio rerio (zebrafish) ]

Gene ID: 566989, updated on 11-Apr-2024

Summary

Official Symbol
sstr3provided by ZNC
Official Full Name
somatostatin receptor 3provided by ZNC
Primary source
ZFIN:ZDB-GENE-061009-35
See related
Ensembl:ENSDARG00000014477 AllianceGenome:ZFIN:ZDB-GENE-061009-35
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-165i8.4
Summary
Predicted to enable G protein-coupled receptor activity and neuropeptide binding activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection. Predicted to be integral component of plasma membrane. Orthologous to human SSTR3 (somatostatin receptor 3). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (29569754..29603734)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (29438977..29472892)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene cytohesin 4a Neighboring gene Rac family small GTPase 2 Neighboring gene eukaryotic translation initiation factor 3, subunit D Neighboring gene sulfotransferase family 3, cytosolic sulfotransferase 1 Neighboring gene GTPase IMAP family member 4-like

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables G protein-coupled receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables neuropeptide binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables somatostatin receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in neuropeptide signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in neuron projection IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
somatostatin receptor type 3; somatostatin receptor type 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    29569754..29603734
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_690273.6XP_695365.1  somatostatin receptor type 5

    UniProtKB/TrEMBL
    A0A8N7TBI1, A2BHH9
    Related
    ENSDARP00000097945.2, ENSDART00000048867.5
    Conserved Domains (2) summary
    pfam00001
    Location:74323
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:65266
    7tm_4; Olfactory receptor