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SNORD116@ small nucleolar RNA, C/D box 116 cluster [ Homo sapiens (human) ]

Gene ID: 692236, discontinued on 1-Dec-2022
  • This record was withdrawn by the HUGO Gene Nomenclature Committee (HGNC).

Summary

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Gene symbol
SNORD116@
Gene description
small nucleolar RNA, C/D box 116 cluster
Gene type
other
RefSeq status
WITHDRAWN
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PET1; PWCR1; HBII-85
Summary
DISCONTINUED: This record was withdrawn by the HUGO Gene Nomenclature Committee (HGNC).
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Genomic context

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See SNORD116@ in Genome Data Viewer
Location:
15q11.2
Annotation release Status Assembly Chr Location
110 latest, but not current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (25051476..25106603)
110 latest, but not current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (22788135..22843260)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (25296623..25351750)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Relationships between UBE3A and SNORD116 expression and features of autism in chromosome 15 imprinting disorders.
    Title: Relationships between UBE3A and SNORD116 expression and features of autism in chromosome 15 imprinting disorders.
  2. Snord116 deletion is associated with the imprinted disorder Prader-Willi syndrome.
    Title: Snord116-dependent diurnal rhythm of DNA methylation in mouse cortex.
Submit: New GeneRIF Correction

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Pathways from PubChem

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General gene information

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Markers

Other Names

  • Prader-Willi syndrome chromosome region 1
  • non-coding RNA in the Prader-Willi critical region

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 (NOTE: not current)

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    25051476..25106603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    22788135..22843260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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