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PHATRDRAFT_17198 predicted protein [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7196045, updated on 21-Dec-2023

Summary

Gene symbol
PHATRDRAFT_17198
Gene description
predicted protein
Locus tag
PHATRDRAFT_17198
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_011669.1 (167825..171576)

Chromosome 1 - NC_011669.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables aminoacyl-tRNA editing activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables isoleucine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in isoleucyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011669.1 Reference assembly

    Range
    167825..171576
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002176498.1XP_002176534.1  predicted protein [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002176534.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7FRF4
    Conserved Domains (4) summary
    cd07960
    Location:715897
    Anticodon_Ia_Ile_BEm; Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases
    cd00818
    Location:477715
    IleRS_core; catalytic core domain of isoleucyl-tRNA synthetases
    PLN02843
    Location:741040
    PLN02843; isoleucyl-tRNA synthetase
    cl00015
    Location:108247
    nt_trans; nucleotidyl transferase superfamily