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GluRS_1 glutamate-trna ligase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7196213, updated on 21-Dec-2023

Summary

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Gene symbol
GluRS_1
Gene description
glutamate-trna ligase
Locus tag
PHATRDRAFT_51430
Gene type
protein coding
RNA name
glutamate-trna ligase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 1
Exon count:
2
Sequence:
Chromosome: 1; NC_011669.1 (1692202..1693852, complement)

Chromosome 1 - NC_011669.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene protein heat shock protein Hsp70 Neighboring gene predicted protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011669.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutamyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of methionyl glutamyl tRNA synthetase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
glutamate-trna ligase
XP_002177350.1
  • involved in proteosynthesis, cytosolic

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011669.1 Reference assembly

    Range
    1692202..1693852 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002177314.1 → XP_002177350.1  glutamate-trna ligase [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002177350.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7FQ83
    Conserved Domains (3) summary
    PLN03233
    Location:1 → 523
    PLN03233; putative glutamate-tRNA ligase; Provisional
    pfam03950
    Location:318 → 490
    tRNA-synt_1c_C; tRNA synthetases class I (E and Q), anti-codon binding domain
    cl00015
    Location:11 → 320
    nt_trans; nucleotidyl transferase superfamily
Nucleotide Protein
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