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PHATRDRAFT_26346 hypothetical protein [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7197892, updated on 21-Dec-2023

Summary

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Gene symbol
PHATRDRAFT_26346
Gene description
hypothetical protein
Locus tag
PHATRDRAFT_26346
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_011672.1 (1259957..1262239, complement)

Chromosome 4 - NC_011672.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011672.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cysteinyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011672.1 Reference assembly

    Range
    1259957..1262239 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002178637.1 → XP_002178673.1  predicted protein [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002178673.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7FUX6
    Conserved Domains (3) summary
    cd00672
    Location:35 → 354
    CysRS_core; catalytic core domain of cysteinyl tRNA synthetase
    PTZ00399
    Location:16 → 646
    PTZ00399; cysteinyl-tRNA-synthetase; Provisional
    pfam09190
    Location:408 → 464
    DALR_2; DALR domain
Nucleotide Protein
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