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FABFb 3-oxoacyl-[acyl-carrier-protein] synthase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7198057, updated on 21-Dec-2023

Summary

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Gene symbol
FABFb
Gene description
3-oxoacyl-[acyl-carrier-protein] synthase
Locus tag
PHATRDRAFT_18940
Gene type
protein coding
RNA name
3-oxoacyl-[acyl-carrier-protein] synthase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_011672.1 (421691..423065, complement)

Chromosome 4 - NC_011672.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011672.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-oxoacyl-[acyl-carrier-protein] synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
3-oxoacyl-[acyl-carrier-protein] synthase
XP_002178506.1
  • Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. May prefer short-chain fatty acid substrates. May use a bipartite plastid targeting signal as predicted by targetP.; Beta-ketoacyl-ACP synthase II; KAS II

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011672.1 Reference assembly

    Range
    421691..423065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002178470.1 → XP_002178506.1  3-oxoacyl-[acyl-carrier-protein] synthase [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002178506.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8J9TXN3, B7FTY6
    Conserved Domains (2) summary
    cd00834
    Location:15 → 451
    KAS_I_II; Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen ...
    TIGR03150
    Location:15 → 452
    fabF; beta-ketoacyl-acyl-carrier-protein synthase II
Nucleotide Protein
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