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PHATRDRAFT_50804 glycolate oxidase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7198075, updated on 21-Dec-2023

Summary

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Gene symbol
PHATRDRAFT_50804
Gene description
glycolate oxidase
Locus tag
PHATRDRAFT_50804
Gene type
protein coding
RNA name
glycolate oxidase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_011672.1 (864829..866446, complement)

Chromosome 4 - NC_011672.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011672.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FMN binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
glycolate oxidase
XP_002178591.1
  • Putative Glycolate- FMN-dependent dehydrogenase. Close to glycolate oxidase & L-lactate dehydrogenase Enzyme involved in glycolate metabolism

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011672.1 Reference assembly

    Range
    864829..866446 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002178555.1 → XP_002178591.1  glycolate oxidase [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002178591.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8J9SF58, B7FUG8
    Conserved Domains (2) summary
    cd02809
    Location:38 → 400
    alpha_hydroxyacid_oxid_FMN; Family of homologous FMN-dependent alpha-hydroxyacid oxidizing enzymes. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate ...
    pfam01070
    Location:45 → 408
    FMN_dh; FMN-dependent dehydrogenase
Nucleotide Protein
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