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FAO1 peroxisomal bifunctional enzyme [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7198195, updated on 21-Dec-2023

Summary

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Gene symbol
FAO1
Gene description
peroxisomal bifunctional enzyme
Locus tag
PHATRDRAFT_55069
Gene type
protein coding
RNA name
peroxisomal bifunctional enzyme
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 23
Exon count:
2
Sequence:
Chromosome: 23; NC_011691.1 (94995..97341, complement)

Chromosome 23 - NC_011691.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011691.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD+ binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
peroxisomal bifunctional enzyme
XP_002184394.1
  • bifunctional enzyme involved in beta-oxidation of fatty acids. 3,2-trans-enoyl-CoA isomerase domain is required for beta-oxidation of unsaturated fatty acids. Converts (3S)-3-hydroxyacyl-CoA to trans-2(or 3)-enoyl-CoA + H(2)O, (S)-3-hydroxyacyl-CoA + NAD(+) to 3-oxoacyl-CoA + NADH, and 3-cis-enoyl-CoA to 2-trans-enoyl-CoA. Contains N- and C- terminal peroxisomal targeting motifs.; Enoyl-CoA hydratase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011691.1 Reference assembly

    Range
    94995..97341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002184358.1 → XP_002184394.1  peroxisomal bifunctional enzyme [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002184394.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7GB36
    Conserved Domains (4) summary
    cd06558
    Location:51 → 221
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
    PRK11154
    Location:52 → 745
    fadJ; multifunctional fatty acid oxidation complex subunit alpha; Reviewed
    pfam00725
    Location:514 → 619
    3HCDH; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
    pfam02737
    Location:332 → 512
    3HCDH_N; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
Nucleotide Protein
Heading Accession and Version

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