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PHATRDRAFT_55126 PFP pyrophosphate dependent phosphofructokinase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7198556, updated on 21-Dec-2023

Summary

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Gene symbol
PHATRDRAFT_55126
Gene description
PFP pyrophosphate dependent phosphofructokinase
Locus tag
PHATRDRAFT_55126
Gene type
protein coding
RNA name
PFP pyrophosphate dependent phosphofructokinase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 25
Exon count:
2
Sequence:
Chromosome: 25; NC_011693.1 (463079..464795, complement)

Chromosome 25 - NC_011693.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011693.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 6-phosphofructokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables diphosphate-fructose-6-phosphate 1-phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fructose 6-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
PFP pyrophosphate dependent phosphofructokinase
XP_002184807.1
  • Pyrophosphate dependent phosphofructokinase catalyzes a reversible reaction that appears to be activated in the direction of fructose 1,6, bisphosphate formation by 2,6-bisphosphate. According to EST data, this gene is upregulated by conditions of nitrate and iron starvation.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011693.1 Reference assembly

    Range
    463079..464795 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002184771.1 → XP_002184807.1  PFP pyrophosphate dependent phosphofructokinase [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002184807.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7GCG9
    Conserved Domains (1) summary
    cl00204
    Location:15 → 417
    PFK; Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. ...
Nucleotide Protein
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