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PHATRDRAFT_55177 spermine/spermidine synthase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7198992, updated on 21-Dec-2023

Summary

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Gene symbol
PHATRDRAFT_55177
Gene description
spermine/spermidine synthase
Locus tag
PHATRDRAFT_55177
Gene type
protein coding
RNA name
spermine/spermidine synthase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 28
Exon count:
3
Sequence:
Chromosome: 28; NC_011696.1 (350461..351722)

Chromosome 28 - NC_011696.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011696.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables spermidine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in spermidine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
spermine/spermidine synthase
XP_002185179.1
  • required for spermine/spermidine biosynthesis

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011696.1 Reference assembly

    Range
    350461..351722
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002185143.1 → XP_002185179.1  spermine/spermidine synthase [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002185179.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7GDS3
    Conserved Domains (1) summary
    PLN02366
    Location:3 → 299
    PLN02366; spermidine synthase
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases