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PHATRDRAFT_41645 hypothetical protein [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7199469, updated on 21-Dec-2023

Summary

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Gene symbol
PHATRDRAFT_41645
Gene description
hypothetical protein
Locus tag
PHATRDRAFT_41645
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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See PHATRDRAFT_41645 in Genome Data Viewer
Location:
chromosome: 33
Exon count:
1
Sequence:
Chromosome: 33; NC_011701.1 (47697..48197, complement)

Chromosome 33 - NC_011701.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011701.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NADH dehydrogenase (ubiquinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables quinone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aerobic respiration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in electron transport coupled proton transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial respiratory chain complex I assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial respiratory chain complex I IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of plasma membrane respiratory chain complex I IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011701.1 Reference assembly

    Range
    47697..48197 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002185573.1 → XP_002185609.1  predicted protein [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002185609.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8J9X5B7, B7GES5
    Conserved Domains (1) summary
    PRK06411
    Location:18 → 155
    PRK06411; NADH-quinone oxidoreductase subunit NuoB
Nucleotide Protein
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