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PHATRDRAFT_26813 hypothetical protein [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7200088, updated on 21-Dec-2023

Summary

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Gene symbol
PHATRDRAFT_26813
Gene description
hypothetical protein
Locus tag
PHATRDRAFT_26813
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 6
Exon count:
2
Sequence:
Chromosome: 6; NC_011674.1 (457684..459213, complement)

Chromosome 6 - NC_011674.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011674.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables homoserine dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in threonine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011674.1 Reference assembly

    Range
    457684..459213 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002179399.1 → XP_002179435.1  predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002179435.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8J9TFZ9, B7FWT4
    Conserved Domains (4) summary
    COG0460
    Location:58 → 367
    ThrA; Homoserine dehydrogenase [Amino acid transport and metabolism]
    pfam00742
    Location:194 → 362
    Homoserine_dh; Homoserine dehydrogenase
    cl09141
    Location:391 → 456
    ACT; ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme
    cl21454
    Location:67 → 158
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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