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ACS4 long chain acyl-coa synthetase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7200591, updated on 21-Dec-2023

Summary

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Gene symbol
ACS4
Gene description
long chain acyl-coa synthetase
Locus tag
PHATRDRAFT_45510
Gene type
protein coding
RNA name
long chain acyl-coa synthetase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 7
Exon count:
4
Sequence:
Chromosome: 7; NC_011675.1 (388128..390574)

Chromosome 7 - NC_011675.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011675.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
long chain acyl-coa synthetase
XP_002179636.1
  • Catalyzes the formation of acyl-CoA from free fatty acid and CoA. Similar to metazoan long-chain acyl-CoA ligases. Lacks transmembrane domains by computer-prediction.; long chain acyl-CoA ligase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011675.1 Reference assembly

    Range
    388128..390574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002179600.1 → XP_002179636.1  long chain acyl-coa synthetase [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002179636.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7FXX6, U5TS58
    Conserved Domains (2) summary
    COG1022
    Location:17 → 663
    FAA1; Long-chain acyl-CoA synthetase (AMP-forming) [Lipid transport and metabolism]
    cl17068
    Location:65 → 662
    AFD_class_I; Adenylate forming domain, Class I superfamily
Nucleotide Protein
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