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Fum fumarate hydratase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7201289, updated on 11-Apr-2024

Summary

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Gene symbol
Fum
Gene description
fumarate hydratase
Locus tag
PHATRDRAFT_36139
Gene type
protein coding
RNA name
fumarate hydratase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 9
Exon count:
2
Sequence:
Chromosome: 9; NC_011677.1 (653681..655161)

Chromosome 9 - NC_011677.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene ornithine aminotransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011677.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fumarate hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fumarate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in malate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of tricarboxylic acid cycle heteromeric enzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
fumarate hydratase
XP_002180479.1
  • TCA cycle & reductive carboxylate cycle. catalyze reaction between malate & fumarate

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011677.1 Reference assembly

    Range
    653681..655161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002180443.1 → XP_002180479.1  fumarate hydratase [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002180479.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7G0H8
    Conserved Domains (2) summary
    cd01362
    Location:1 → 451
    Fumarase_classII; Class II fumarases
    PLN00134
    Location:1 → 458
    PLN00134; fumarate hydratase; Provisional
Nucleotide Protein
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