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PHATRDRAFT_14002 beta-mannosyltransferase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7202369, updated on 21-Dec-2023

Summary

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Gene symbol
PHATRDRAFT_14002
Gene description
beta-mannosyltransferase
Locus tag
PHATRDRAFT_14002
Gene type
protein coding
RNA name
beta-mannosyltransferase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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See PHATRDRAFT_14002 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
2
Sequence:
Chromosome: 13; NC_011681.1 (187936..189201)

Chromosome 13 - NC_011681.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011681.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
beta-mannosyltransferase
XP_002181503.1
  • enzyme involved in N-Glycan Biosynthesis

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011681.1 Reference assembly

    Range
    187936..189201
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002181467.1 → XP_002181503.1  beta-mannosyltransferase, partial [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002181503.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7G3V4
    Conserved Domains (2) summary
    PLN02275
    Location:17 → 398
    PLN02275; transferase, transferring glycosyl groups
    cl10013
    Location:15 → 398
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
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