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GALK1 galactokinase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7203303, updated on 21-Dec-2023

Summary

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Gene symbol
GALK1
Gene description
galactokinase
Locus tag
PHATRDRAFT_3369
Gene type
protein coding
RNA name
galactokinase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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See GALK1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
1
Sequence:
Chromosome: 16; NC_011684.1 (379926..381116, complement)

Chromosome 16 - NC_011684.1Genomic Context describing neighboring genes Neighboring gene kinesin family-like protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011684.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
galactokinase
XP_002182673.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011684.1 Reference assembly

    Range
    379926..381116 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002182637.1 → XP_002182673.1  galactokinase, partial [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002182673.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8J9T2S8, B7G669
    Conserved Domains (3) summary
    PRK05101
    Location:1 → 397
    PRK05101; galactokinase; Provisional
    pfam08544
    Location:300 → 380
    GHMP_kinases_C; GHMP kinases C terminal
    pfam10509
    Location:1 → 37
    GalKase_gal_bdg; Galactokinase galactose-binding signature
Nucleotide Protein
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