U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ELO6b_1 delta 6 desaturase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7203341, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
ELO6b_1
Gene description
delta 6 desaturase
Locus tag
PHATRDRAFT_22274
Gene type
protein coding
RNA name
delta 6 desaturase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 16
Exon count:
2
Sequence:
Chromosome: 16; NC_011684.1 (560197..561066)

Chromosome 16 - NC_011684.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_011684.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid elongase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation, monounsaturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid elongation, polyunsaturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid elongation, saturated fatty acid IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
delta 6 desaturase
XP_002182556.1
  • delta 6 elongase, microsomal precursor. Involved in the biosynthesis of polyunsaturated fatty acids. 5 predicted transmembrane domains. Catalyzes conversion of acyl -CoAs such as alpha-linoleoyl-CoA or stearidonyl-CoA to eicosatrienoyl-CoA or eicosatetraenoyl-CoA via the addition of two carbons from malonyl CoA.

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011684.1 Reference assembly

    Range
    560197..561066
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002182520.1 → XP_002182556.1  delta 6 desaturase [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002182556.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7G6E0
    Conserved Domains (1) summary
    pfam01151
    Location:6 → 214
    ELO; GNS1/SUR4 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases