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PHATRDRAFT_54844 alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7203448, updated on 21-Dec-2023

Summary

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Gene symbol
PHATRDRAFT_54844
Gene description
alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
Locus tag
PHATRDRAFT_54844
Gene type
protein coding
RNA name
alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 16
Exon count:
1
Sequence:
Chromosome: 16; NC_011684.1 (89066..90505, complement)

Chromosome 16 - NC_011684.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011684.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
XP_002182611.1
  • Enzyme involved in N-glycan biosynthetic pathway

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011684.1 Reference assembly

    Range
    89066..90505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002182575.1 → XP_002182611.1  alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, partial [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002182611.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8J9X2C7, B7G5V7
    Conserved Domains (1) summary
    cl11394
    Location:85 → 413
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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