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PHATRDRAFT_1129 hypothetical protein [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7203490, updated on 11-Apr-2024

Summary

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Gene symbol
PHATRDRAFT_1129
Gene description
hypothetical protein
Locus tag
PHATRDRAFT_1129
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 16
Exon count:
1
Sequence:
Chromosome: 16; NC_011684.1 (345208..346893)

Chromosome 16 - NC_011684.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011684.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerol-3-phosphate dehydrogenase (quinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerol-3-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glycerol-3-phosphate dehydrogenase (FAD) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011684.1 Reference assembly

    Range
    345208..346893
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002182480.1 → XP_002182516.1  predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002182516.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8J9X3Q9, B7G655
    Conserved Domains (2) summary
    COG0578
    Location:7 → 559
    GlpA; Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
    pfam16901
    Location:419 → 545
    DAO_C; C-terminal domain of alpha-glycerophosphate oxidase
Nucleotide Protein
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