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PK1 pyruvate kinase 1 [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7203591, updated on 21-Dec-2023

Summary

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Gene symbol
PK1
Gene description
pyruvate kinase 1
Locus tag
PHATRDRAFT_22404
Gene type
protein coding
RNA name
pyruvate kinase 1
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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See PK1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
2
Sequence:
Chromosome: 17; NC_011685.1 (329868..331930)

Chromosome 17 - NC_011685.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene type II DNA topoisomerase 6 subunit Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011685.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables potassium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyruvate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
pyruvate kinase 1
XP_002182818.1
  • pyruvate kinase 1, similar to GenBank AY608677, but N-terminus differs due to frameshift between Phatr2 and AY608677, contains bipartite plastid targeting presequence with conserved motif at signal peptide cleavage site

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011685.1 Reference assembly

    Range
    329868..331930
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002182782.1 → XP_002182818.1  pyruvate kinase 1 [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002182818.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7G6Z9, B8XA72, Q2TSX0
    Conserved Domains (2) summary
    PRK06247
    Location:79 → 575
    PRK06247; pyruvate kinase; Provisional
    cl23794
    Location:79 → 578
    Pyruvate_Kinase; Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors. Like other allosteric enzymes, PK has a high substrate affinity R state and a low ...
Nucleotide Protein
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