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PHATRDRAFT_5527 predicted protein [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7203709, updated on 4-Nov-2022

Summary

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Gene symbol
PHATRDRAFT_5527
Gene description
predicted protein
Locus tag
PHATRDRAFT_5527
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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See PHATRDRAFT_5527 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
1
Sequence:
Chromosome: 17; NC_011685.1 (642214..642723)

Chromosome 17 - NC_011685.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene PolyAdenylation factor subunit 1 Neighboring gene predicted protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011685.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
predicted protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011685.1 Reference assembly

    Range
    642214..642723
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002182842.1 → XP_002182878.1  predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002182878.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8J9TDX8, B7G7B4
    Conserved Domains (1) summary
    cd06558
    Location:1 → 170
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
Nucleotide Protein
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