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CysK eukaryotic cysteine synthase [ Phaeodactylum tricornutum CCAP 1055/1 ]

Gene ID: 7203770, updated on 21-Dec-2023

Summary

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Gene symbol
CysK
Gene description
eukaryotic cysteine synthase
Locus tag
PHATRDRAFT_54915
Gene type
protein coding
RNA name
eukaryotic cysteine synthase
RefSeq status
PROVISIONAL
Organism
Phaeodactylum tricornutum CCAP 1055/1 (strain: CCAP 1055/1)
Lineage
Eukaryota; Stramenopiles; Bacillariophyta; Bacillariophyceae; Bacillariophycidae; Naviculales; Phaeodactylaceae; Phaeodactylum
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Genomic context

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Location:
chromosome: 17
Exon count:
2
Sequence:
Chromosome: 17; NC_011685.1 (650306..651610)

Chromosome 17 - NC_011685.1Genomic Context describing neighboring genes Neighboring gene PolyAdenylation factor subunit 1 Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011685.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cysteine biosynthetic process from serine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
eukaryotic cysteine synthase
XP_002182880.1
  • cysteine synthase, eukaryotic gene, which contains N terminal putative ER signal peptide (SignalP score= 0.923); putatively chloroplast targeted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011685.1 Reference assembly

    Range
    650306..651610
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002182844.1 → XP_002182880.1  eukaryotic cysteine synthase [Phaeodactylum tricornutum CCAP 1055/1]

    See identical proteins and their annotated locations for XP_002182880.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B7G7B7
    Conserved Domains (2) summary
    pfam00291
    Location:13 → 314
    PALP; Pyridoxal-phosphate dependent enzyme
    cl00342
    Location:13 → 338
    Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...
Nucleotide Protein
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