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camk2b calcium/calmodulin dependent protein kinase II beta [ Danio rerio (zebrafish) ]

Gene ID: 798222, updated on 27-Mar-2024

Summary

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Gene symbol
camk2b
Gene description
calcium/calmodulin dependent protein kinase II beta
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
21
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (45071482..45135800)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (45224867..45289141)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S24 Neighboring gene NudC domain containing 3 Neighboring gene oxoglutarate dehydrogenase b Neighboring gene poly (ADP-ribose) glycohydrolase, like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

General protein information

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Preferred Names
calcium/calmodulin-dependent protein kinase type II subunit beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    45071482..45135800
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009305704.3 → XP_009303979.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A8M3AXB0
    Conserved Domains (3) summary
    smart00220
    Location:13 → 271
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:405 → 532
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  2. XM_009305705.3 → XP_009303980.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X3

    UniProtKB/TrEMBL
    A0A8M3BDF1
    Conserved Domains (3) summary
    smart00220
    Location:13 → 271
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:390 → 517
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  3. XM_009305706.3 → XP_009303981.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X6

    UniProtKB/TrEMBL
    A0A8M3AX87
    Conserved Domains (3) summary
    smart00220
    Location:13 → 271
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:380 → 507
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  4. XM_009305707.3 → XP_009303982.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X8

    UniProtKB/TrEMBL
    A0A8M3B6M5
    Conserved Domains (3) summary
    smart00220
    Location:13 → 271
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:365 → 492
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  5. XM_021479480.1 → XP_021335155.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X2

    UniProtKB/TrEMBL
    A0A8M9QLC5
    Conserved Domains (2) summary
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:404 → 531
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  6. XM_021479485.1 → XP_021335160.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X13

    UniProtKB/TrEMBL
    A0A8M9QLC8
    Conserved Domains (2) summary
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:389 → 516
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  7. XM_021479482.1 → XP_021335157.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X7

    UniProtKB/TrEMBL
    A0A8M9PUH7
    Conserved Domains (2) summary
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:379 → 506
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  8. XM_001338641.7 → XP_001338677.4  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X4

    UniProtKB/TrEMBL
    A0A8M1PUN4
    Conserved Domains (3) summary
    smart00220
    Location:13 → 271
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:385 → 512
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  9. XM_009305708.3 → XP_009303983.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X14

    UniProtKB/TrEMBL
    A0A8M3B3R4
    Conserved Domains (3) summary
    smart00220
    Location:13 → 271
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:370 → 497
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  10. XM_005155487.4 → XP_005155544.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X9

    UniProtKB/TrEMBL
    A0A8M2B1J9
    Conserved Domains (3) summary
    smart00220
    Location:13 → 271
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:360 → 487
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  11. XM_005155488.4 → XP_005155545.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X11

    UniProtKB/TrEMBL
    A0A8M2B1Y8
    Conserved Domains (3) summary
    smart00220
    Location:13 → 271
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:345 → 472
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  12. XM_021479481.1 → XP_021335156.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X5

    UniProtKB/TrEMBL
    A0A8M9QHD1
    Conserved Domains (2) summary
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:384 → 511
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  13. XM_021479486.1 → XP_021335161.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X15

    UniProtKB/TrEMBL
    A0A8M9QHD4
    Conserved Domains (2) summary
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:369 → 496
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  14. XM_021479483.1 → XP_021335158.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X10

    UniProtKB/TrEMBL
    A0A8M9Q6V4
    Conserved Domains (2) summary
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:359 → 486
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain

  15. XM_021479484.1 → XP_021335159.1  calcium/calmodulin-dependent protein kinase type II subunit beta isoform X12

    UniProtKB/TrEMBL
    A0A8M9QCS7
    Conserved Domains (2) summary
    cd14086
    Location:11 → 302
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    pfam08332
    Location:344 → 471
    CaMKII_AD; Calcium/calmodulin dependent protein kinase II association domain
Nucleotide Protein
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