U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PF3D7_1022800 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), putative [ Plasmodium falciparum 3D7 ]

Gene ID: 810378, updated on 17-May-2024

Summary

Go to the top of the page Help
Gene symbol
PF3D7_1022800
Gene description
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), putative
Primary source
PlasmoDB:PF3D7_1022800
Locus tag
PF3D7_1022800
Gene type
protein coding
RNA name
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 10
Exon count:
1
Sequence:
Chromosome: 10; NC_037281.1 (955883..958357)

Chromosome 10 - NC_037281.1Genomic Context describing neighboring genes Neighboring gene kelch protein K10 Neighboring gene phospholipid scramblase, putative Neighboring gene CDGSH iron-sulfur domain-containing protein, putative Neighboring gene conserved Plasmodium membrane protein, unknown function

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037281.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Characterization of 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (IspG) from Plasmodium vivax and it's potential as an antimalarial drug target. Saggu GS, et al. Int J Biol Macromol, 2017 Mar. PMID 28007455
  2. Kinase-associated endopeptidase 1 (Kae1) participates in an atypical ribosome-associated complex in the apicoplast of Plasmodium falciparum. Mallari JP, et al. J Biol Chem, 2014 Oct 24. PMID 25204654, Free PMC Article
  3. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
  4. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556
  5. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding ISO
Inferred from Sequence Orthology
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Component Evidence Code Pubs
located_in apicoplast HDA PubMed 
located_in apicoplast IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), putative
XP_001347505.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037281.1 Reference assembly

    Range
    955883..958357
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001347469.1 → XP_001347505.1  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001347505.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024V5V4, A0A024W5X6, A0A024X6V3, A0A0L1I7Y8, A0A0L7KK90, Q8IJH7, Q9BJX5, W4IH81, W4J2X7, W7FPR1, W7JYC2
    Conserved Domains (1) summary
    cl30731
    Location:106 → 824
    PRK00694; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Validated
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases