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PF3D7_0503100 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 812925, updated on 10-Sep-2023

Summary

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Gene symbol
PF3D7_0503100
Gene description
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, putative
Locus tag
PF3D7_0503100
Gene type
protein coding
RNA name
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_004326.2 (127064..128677, complement)

Chromosome 5 - NC_004326.2Genomic Context describing neighboring genes Neighboring gene Tim10/DDP family zinc finger protein, putative Neighboring gene 50S ribosomal protein L28, apicoplast, putative Neighboring gene conserved Plasmodium protein, unknown function Neighboring gene serine/arginine-rich splicing factor 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004326.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Localization of organellar proteins in Plasmodium falciparum using a novel set of transfection vectors and a new immunofluorescence fixation method. Tonkin CJ, et al. Mol Biochem Parasitol, 2004 Sep. PMID 15279947
  2. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article
  3. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GeneDB

Component Evidence Code Pubs
located_in apicoplast HDA PubMed 
located_in apicoplast IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, putative
XP_001351589.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004326.2 Reference assembly

    Range
    127064..128677 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001351553.1 → XP_001351589.1  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001351589.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024VAG3, A0A024WDH0, A0A024WVM9, A0A024XCZ3, A0A0L1I9B4, A0A0L7KD28, A0A1B1TK84, Q8I470, W4IL67, W4IU53, W7FHL1, W7FKZ9, W7K0E4, W7K300
    Conserved Domains (1) summary
    COG1947
    Location:133 → 385
    IspE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase [Lipid transport and metabolism]
Nucleotide Protein
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