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PF3D7_0106100 V-type proton ATPase subunit C, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 813197, updated on 17-May-2024

Summary

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Gene symbol
PF3D7_0106100
Gene description
V-type proton ATPase subunit C, putative
Primary source
PlasmoDB:PF3D7_0106100
Locus tag
PF3D7_0106100
Gene type
protein coding
RNA name
V-type proton ATPase subunit C, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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See PF3D7_0106100 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_004325.2 (260658..261809, complement)

Chromosome 1 - NC_004325.2Genomic Context describing neighboring genes Neighboring gene 3'-5' exonuclease, putative Neighboring gene conserved protein, unknown function Neighboring gene EF hand domain-containing protein, putative Neighboring gene calcium-transporting ATPase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004325.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation. Briquet S, et al. PLoS One, 2018. PMID 30379851, Free PMC Article
  2. Organellar proteomics reveals hundreds of novel nuclear proteins in the malaria parasite Plasmodium falciparum. Oehring SC, et al. Genome Biol, 2012 Nov 26. PMID 23181666, Free PMC Article
  3. Sequence of Plasmodium falciparum chromosomes 1, 3-9 and 13. Hall N, et al. Nature, 2002 Oct 3. PMID 12368867

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in nucleus HDA PubMed 

General protein information

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Preferred Names
V-type proton ATPase subunit C, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004325.2 Reference assembly

    Range
    260658..261809 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001350956.1 → XP_001350992.1  V-type proton ATPase subunit C, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001350992.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024VDD7, A0A024VI58, A0A024WEM0, A0A024WXM8, A0A024XEQ2, A0A0L1IB88, A0A0L7K5D0, Q8I280, W4IQY0, W4J763, W7FN45, W7G5P0, W7JVU6, W7KNE3
    Conserved Domains (1) summary
    pfam03223
    Location:8 → 377
    V-ATPase_C; V-ATPase subunit C
Nucleotide Protein
Heading Accession and Version

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