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PF3D7_1322000 nucleoside-diphosphatase, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 813671, updated on 16-Oct-2023

Summary

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Gene symbol
PF3D7_1322000
Gene description
nucleoside-diphosphatase, putative
Locus tag
PF3D7_1322000
Gene type
protein coding
RNA name
nucleoside-diphosphatase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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Location:
chromosome: 13
Exon count:
4
Sequence:
Chromosome: 13; NC_004331.3 (916360..918594)

Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene protein transport protein SFT2, putative Neighboring gene conserved protein, unknown function Neighboring gene histone-lysine N-methyltransferase SET2 Neighboring gene conserved Plasmodium protein, unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004331.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Return to sender: use of Plasmodium ER retrieval sequences to study protein transport in the infected erythrocyte and predict putative ER protein families. Külzer S, et al. Parasitol Res, 2009 Jun. PMID 19294420
  2. A network-based approach reveals novel invasion and Maurer's clefts-related proteins in Plasmodium falciparum. Das D, et al. Mol Omics, 2019 Dec 2. PMID 31631203
  3. Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. Krogh A, et al. J Mol Biol, 2001 Jan 19. PMID 11152613
  4. A protein interaction network of the malaria parasite Plasmodium falciparum. LaCount DJ, et al. Nature, 2005 Nov 3. PMID 16267556

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by GeneDB

Component Evidence Code Pubs
located_in Maurer's cleft RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in endoplasmic reticulum lumen RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
located_in membrane ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
nucleoside-diphosphatase, putative
XP_001349959.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004331.3 Reference assembly

    Range
    916360..918594
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001349923.1 → XP_001349959.1  nucleoside-diphosphatase, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001349959.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024W3X7, A0A024WK54, A0A024X277, A0A2I0BVR7, Q8IE96, W4IXA0, W7JIY2
    Conserved Domains (1) summary
    cl17037
    Location:51 → 541
    NBD_sugar-kinase_HSP70_actin; Nucleotide-Binding Domain of the sugar kinase/HSP70/actin superfamily
Nucleotide Protein
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