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PF3D7_1358000 patatin-like phospholipase, putative [ Plasmodium falciparum 3D7 ]

Gene ID: 813847, updated on 6-Oct-2023

Summary

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Gene symbol
PF3D7_1358000
Gene description
patatin-like phospholipase, putative
Locus tag
PF3D7_1358000
Gene type
protein coding
RNA name
patatin-like phospholipase, putative
RefSeq status
PROVISIONAL
Organism
Plasmodium falciparum 3D7 (isolate: 3D7)
Lineage
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
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Genomic context

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See PF3D7_1358000 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
2
Sequence:
Chromosome: 13; NC_004331.3 (2297900..2304194, complement)

Chromosome 13 - NC_004331.3Genomic Context describing neighboring genes Neighboring gene T-complex protein 1 subunit delta Neighboring gene pyrroline-5-carboxylate reductase, putative Neighboring gene Sas10 domain-containing protein, putative Neighboring gene conserved Plasmodium protein, unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004331.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TgPL2, a patatin-like phospholipase domain-containing protein, is involved in the maintenance of apicoplast lipids homeostasis in Toxoplasma. Lévêque MF, et al. Mol Microbiol, 2017 Jul. PMID 28419631
  2. Functional annotation of serine hydrolases in the asexual erythrocytic stage of Plasmodium falciparum. Elahi R, et al. Sci Rep, 2019 Nov 26. PMID 31772212, Free PMC Article
  3. Integrative proteomics and bioinformatic prediction enable a high-confidence apicoplast proteome in malaria parasites. Boucher MJ, et al. PLoS Biol, 2018 Sep. PMID 30212465, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by GeneDB

Function Evidence Code Pubs
enables lipase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within lipid metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in apicoplast HDA PubMed 
located_in apicoplast ISO
Inferred from Sequence Orthology
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase, putative
XP_001350291.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004331.3 Reference assembly

    Range
    2297900..2304194 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001350255.1 → XP_001350291.1  patatin-like phospholipase, putative [Plasmodium falciparum 3D7]

    See identical proteins and their annotated locations for XP_001350291.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A024W1P0, A0A2I0BS69, A0A5K1K9G0
    Conserved Domains (2) summary
    pfam08226
    Location:1828 → 1875
    DUF1720; Domain of unknown function (DUF1720)
    cl11396
    Location:1129 → 1549
    Patatin_and_cPLA2; Patatins and Phospholipases
Nucleotide Protein
Heading Accession and Version

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