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GRS1 glycine--tRNA ligase [ Saccharomyces cerevisiae S288C ]

Gene ID: 852418, updated on 17-May-2024

Summary

Gene symbol
GRS1
Gene description
glycine--tRNA ligase
Primary source
FungiDB:YBR121C
Locus tag
YBR121C
See related
SGD:S000000325; AllianceGenome:SGD:S000000325
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables glycine-tRNA ligase activity. Involved in DNA-templated transcription, termination and mitochondrial glycyl-tRNA aminoacylation. Located in mitochondrion. Used to study Charcot-Marie-Tooth disease type 2D. Human ortholog(s) of this gene implicated in Charcot-Marie-Tooth disease type 2D and distal hereditary motor neuronopathy type 5A. Orthologous to human GARS1 (glycyl-tRNA synthetase 1). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_001134.8 (481364..483367, complement)

Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene Mud1p Neighboring gene Cbp6p Neighboring gene mitochondrial 54S ribosomal protein YmL36 Neighboring gene transcription factor TFIIIC subunit TFC1

Bibliography

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables aminoacyl-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 
enables catalytic activity, acting on a tRNA IEA
Inferred from Electronic Annotation
more info
 
enables glycine-tRNA ligase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables glycine-tRNA ligase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables glycine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 
enables glycine-tRNA ligase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables sequence-specific mRNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in DNA-templated transcription termination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in glycyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 
involved_in glycyl-tRNA aminoacylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mitochondrial glycyl-tRNA aminoacylation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in mitochondrial glycyl-tRNA aminoacylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in tRNA aminoacylation for protein translation IEA
Inferred from Electronic Annotation
more info
 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasm IMP
Inferred from Mutant Phenotype
more info
PubMed 
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion IMP
Inferred from Mutant Phenotype
more info
PubMed 

General protein information

Preferred Names
glycine--tRNA ligase
NP_009679.2
  • Cytoplasmic and mitochondrial glycyl-tRNA synthase; ligates glycine to the cognate anticodon-bearing tRNA; transcription termination factor that may interact with the 3'-end of pre-mRNA to promote 3'-end formation; GRS1 has a paralog, GRS2, that arose from the whole genome duplication; human homolog GARS implicated in Charcot-Marie-Tooth disease, can complement yeast null mutant

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001134.8 Reference assembly

    Range
    481364..483367 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178469.2NP_009679.2  TPA: glycine--tRNA ligase [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009679.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A8H4BU00, B3LN34, B5VE81, C7GY06, G2W9C6, N1PAT2
    Conserved Domains (1) summary
    TIGR00389
    Location:15640
    glyS_dimeric; glycyl-tRNA synthetase, dimeric type