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dapE succinyl-diaminopimelate desuccinylase DapE [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 887386, updated on 6-Oct-2023

Summary

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Gene symbol
dapE
Gene description
succinyl-diaminopimelate desuccinylase DapE
Locus tag
Rv1202
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (1345260..1346324)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene insertion sequence element IS1081 transposase Neighboring gene integral membrane transport protein Neighboring gene 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of succinyl-diaminopimelate desuccinylase (Rv1202, DapE) from Mycobacterium tuberculosis. Reinhard L, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2012 Sep 1. PMID 22949202, Free PMC Article
  2. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  3. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  4. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. crystals of dapE belonged to the monoclinic space group P2(1), with unit-cell parameters a = 79.7, b = 76.0, c = 82.9 A, beta = 119 degrees
    Title: Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of succinyl-diaminopimelate desuccinylase (Rv1202, DapE) from Mycobacterium tuberculosis.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
succinyl-diaminopimelate desuccinylase DapE

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    1345260..1346324
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_177796.1 succinyl-diaminopimelate desuccinylase DapE [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for YP_177796.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2I7W5V2
    Conserved Domains (1) summary
    PRK13007
    Location:1 → 352
    PRK13007; succinyl-diaminopimelate desuccinylase; Reviewed
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P9WHS9.1

Gene LinkOut

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Molecular Biology Databases