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deoC 2-deoxyribose-5-phosphate aldolase [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 888425, updated on 4-Feb-2024

Summary

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Gene symbol
deoC
Gene description
2-deoxyribose-5-phosphate aldolase
Locus tag
Rv0478
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (567222..567896)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene transmembrane protein Neighboring gene hypothetical protein Neighboring gene membrane protein Neighboring gene amidohydrolase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
2-deoxyribose-5-phosphate aldolase
NP_214992.1
  • phosphodeoxyriboaldolase (deoxyriboaldolase) Belongs to the DEOC/FBAB family of aldolases, DEOC subfamily.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    567222..567896
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_214992.1 deoxyribose-phosphate aldolase [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_214992.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A655AQI6
    Conserved Domains (1) summary
    PRK00507
    Location:5 → 223
    PRK00507; deoxyribose-phosphate aldolase; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P9WP03.1

Gene LinkOut

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Molecular Biology Databases