U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

setA sugar exporter SetA [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 944793, updated on 2-May-2024

Summary

Go to the top of the page Help
Gene symbol
setA
Gene description
sugar exporter SetA
Primary source
ASAP:ABE-0000257
Locus tag
b0070
See related
ECOCYC:EG11754
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0072; yabM
Summary
Major Facilitator Superfamily (MFS). [More information is available at EcoGene: EG11754]. YabM is a probable efflux transporter for sugars such as lactose and IPTG. [More information is available at EcoCyc: EG11754].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (77621..78799)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional dual regulator SgrR Neighboring gene ncRNA Neighboring gene PtsG glucose transporter inhibitor Neighboring gene 3-isopropylmalate dehydratase subunit LeuD Neighboring gene 3-isopropylmalate dehydratase subunit LeuC

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Regulation and function of Escherichia coli sugar efflux transporter A (SetA) during glucose-phosphate stress. Sun Y, et al. J Bacteriol, 2011 Jan. PMID 20971900, Free PMC Article
  2. The identification of a new family of sugar efflux pumps in Escherichia coli. Liu JY, et al. Mol Microbiol, 1999 Mar. PMID 10209755
  3. Functional and biochemical characterization of Escherichia coli sugar efflux transporters. Liu JY, et al. J Biol Chem, 1999 Aug 13. PMID 10438463
  4. The maltodextrin system of Escherichia coli: metabolism and transport. Dippel R, et al. J Bacteriol, 2005 Dec. PMID 16321936, Free PMC Article
  5. Microbial drug efflux proteins of the major facilitator superfamily. Saidijam M, et al. Curr Drug Targets, 2006 Jul. PMID 16842212

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables carbohydrate:proton symporter activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables carbohydrate:proton symporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within carbohydrate transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in carbohydrate transport IEA
Inferred from Electronic Annotation
more info
  
involved_in cellular response to glucose-phosphate stress IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within cellular response to glucose-phosphate stress IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within cellular response to glucose-phosphate stress IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in glucose transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within glucose transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in lactose transport IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within lactose transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in organic substance transport IEA
Inferred from Electronic Annotation
more info
  
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sugar exporter SetA

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    77621..78799
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_025293.1 sugar exporter SetA [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for YP_025293.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B9ACH8
    Conserved Domains (1) summary
    TIGR00899
    Location:17 → 391
    2A0120; sugar efflux transporter
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials