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ynfG putative oxidoreductase YnfG [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945638, updated on 4-Apr-2024

Summary

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Gene symbol
ynfG
Gene description
putative oxidoreductase YnfG
Primary source
ASAP:ABE-0005309
Locus tag
b1589
See related
ECOCYC:G6847
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1584
Summary
The physiological substrate and relevance of the YnfFGH S- and N-oxide reductase is unknown. [More information is available at EcoGene: EG13845]. YnfG is highly similar to DmsB, the iron-sulfur cluster-containing subunit of the dimethyl sulfoxide reductase heterotrimer, and cross-reacts with an anti-DmsB antibody. [More information is available at EcoCyc: G6847].
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Genomic context

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Sequence:
NC_000913.3 (1662990..1663607)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative selenate reductase YnfE Neighboring gene putative selenate reductase YnfF Neighboring gene putative menaquinol dehydrogenase Neighboring gene redox enzyme maturation protein DmsD

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Activation and repression at the Escherichia coli ynfEFGHI operon promoter. Xu M, et al. J Bacteriol, 2009 May. PMID 19251855, Free PMC Article
  2. The Escherichia coli ynfEFGHI operon encodes polypeptides which are paralogues of dimethyl sulfoxide reductase (DmsABC). Lubitz SP, et al. Arch Biochem Biophys, 2003 Oct 15. PMID 14522592
  3. A genetic analysis of in vivo selenate reduction by Salmonella enterica serovar Typhimurium LT2 and Escherichia coli K12. Guymer D, et al. Arch Microbiol, 2009 Jun. PMID 19415239
  4. Genome-wide screening of genes required for swarming motility in Escherichia coli K-12. Inoue T, et al. J Bacteriol, 2007 Feb. PMID 17122336, Free PMC Article
  5. TCDB: the Transporter Classification Database for membrane transport protein analyses and information. Saier MH Jr, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381841, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in anaerobic respiration NAS
Non-traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
part_of oxidoreductase complex NAS
Non-traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
putative oxidoreductase YnfG
NP_416106.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1662990..1663607
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416106.1 putative oxidoreductase YnfG [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416106.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A826P5R2
    Conserved Domains (1) summary
    TIGR02951
    Location:4 → 163
    DMSO_dmsB; DMSO reductase, iron-sulfur subunit
Nucleotide Protein
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