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potC spermidine preferential ABC transporter membrane subunit PotC [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945691, updated on 6-Oct-2023

Summary

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Gene symbol
potC
Gene description
spermidine preferential ABC transporter membrane subunit PotC
Primary source
ASAP:ABE-0003791
Locus tag
b1124
See related
ECOCYC:EG10751
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1110
Summary
PotBCAD spermidine/putrescine ABC transport system. [More information is available at EcoGene: EG10751]. PotABCD is an ATP-dependent polyamine transporter that is a member of the ATP-Binding Cassette (ABC) Superfamily of transporters . [More information is available at EcoCyc: EG10751].
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Genomic context

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Sequence:
NC_000913.3 (1182826..1183620, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene CobB-S;protein-lysine deacetylase/desuccinylase/lipoamidase Neighboring gene putative inner membrane protein YcfZ Neighboring gene putative inner membrane protein YmfA Neighboring gene spermidine preferential ABC transporter periplasmic binding protein Neighboring gene spermidine preferential ABC transporter membrane subunit PotB Neighboring gene spermidine preferential ABC transporter ATP binding subunit Neighboring gene peptidase T

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification and functions of amino acid residues in PotB and PotC involved in spermidine uptake activity. Higashi K, et al. J Biol Chem, 2010 Dec 10. PMID 20937813, Free PMC Article
  2. Effects of ethyl and benzyl analogues of spermine on Escherichia coli peptidyltransferase activity, polyamine transport, and cellular growth. Karahalios P, et al. J Bacteriol, 1999 Jul. PMID 10383956, Free PMC Article
  3. Physical mapping of the Escherichia coli pepT and potABCD genes. Lombardo MJ, et al. J Bacteriol, 1993 Dec. PMID 8244951, Free PMC Article
  4. Characteristics of the gene for a spermidine and putrescine transport system that maps at 15 min on the Escherichia coli chromosome. Furuchi T, et al. J Biol Chem, 1991 Nov 5. PMID 1939142
  5. Dependence of swarming in Escherichia coli K-12 on spermidine and the spermidine importer. Kurihara S, et al. FEMS Microbiol Lett, 2009 May. PMID 19493013

See all (19) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ABC-type polyamine transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within putrescine transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in putrescine transport NAS
Non-traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within spermidine transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in spermidine transmembrane transport NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex TAS
Traceable Author Statement
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane NAS
Non-traceable Author Statement
more info
 PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane ISM
Inferred from Sequence Model
more info
 PubMed 

General protein information

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Preferred Names
spermidine preferential ABC transporter membrane subunit PotC
NP_415642.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1182826..1183620 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415642.1 spermidine preferential ABC transporter membrane subunit PotC [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415642.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A827XNA8
    Conserved Domains (1) summary
    PRK09500
    Location:2 → 257
    potC; spermidine/putrescine ABC transporter membrane protein; Reviewed
Nucleotide Protein
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