U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

paaD phenylacetate degradation protein [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945959, updated on 4-Feb-2024

Summary

Gene symbol
paaD
Gene description
phenylacetate degradation protein
Primary source
ASAP:ABE-0004655
Locus tag
b1391
See related
ECOCYC:G6712
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1388; ydbQ
Summary
PaaABCDE is a multi-subunit oxygenase that hydroxylates phenylacetyl-CoA. [More information is available at EcoGene: EG13738]. PaaA, PaaB, PaaC, and PaaD are predicted to be subunits of a phenylacetate-CoA oxygenase involved in phenylacetate catabolism . [More information is available at EcoCyc: G6712].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Sequence:
NC_000913.3 (1455925..1456422)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene phenylacetyl-CoA 1,2-epoxidase subunit B Neighboring gene phenylacetyl-CoA 1,2-epoxidase, structural subunit Neighboring gene phenylacetyl-CoA 1,2-epoxidase, reductase subunit Neighboring gene putative 2,3-dehydroadipyl-CoA hydratase Neighboring gene putative ring 1,2-epoxyphenylacetyl-CoA isomerase (oxepin-CoA forming)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
phenylacetate degradation protein

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1455925..1456422
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415909.4 phenylacetate degradation protein [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415909.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8T5ZYZ8
    Conserved Domains (1) summary
    TIGR02159
    Location:22165
    PA_CoA_Oxy4; phenylacetate-CoA oxygenase, PaaJ subunit