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narY nitrate reductase Z subunit beta [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946034, updated on 4-Apr-2024

Summary

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Gene symbol
narY
Gene description
nitrate reductase Z subunit beta
Primary source
ASAP:ABE-0004896
Locus tag
b1467
See related
ECOCYC:EG10647
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
chlZ; ECK1461
Summary
Stationary phase induced, RpoS-dependent. [More information is available at EcoGene: EG10647]. The subunit is the electron transfer subunit containing the iron-sulfur clusters . [More information is available at EcoCyc: EG10647].
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Genomic context

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Sequence:
NC_000913.3 (1537309..1538853, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene PF02567 family protein YddE Neighboring gene nitrate reductase Z subunit gamma Neighboring gene NarW, putative private chaperone for NarZ nitrate reductase subunit Neighboring gene nitrate reductase Z subunit alpha Neighboring gene nitrate/nitrite transporter NarU Neighboring gene pseudo

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Localization and regulation of synthesis of nitrate reductase in Escherichia coli. Showe MK, et al. J Bacteriol, 1968 Apr. PMID 4869216, Free PMC Article
  2. Biochemical and immunological evidence for a second nitrate reductase in Escherichia coli K12. Iobbi C, et al. Eur J Biochem, 1987 Oct 15. PMID 3311749
  3. Purification and further characterization of the second nitrate reductase of Escherichia coli K12. Iobbi-Nivol C, et al. Eur J Biochem, 1990 Mar 30. PMID 2139607
  4. EPR and redox characterization of iron-sulfur centers in nitrate reductases A and Z from Escherichia coli. Evidence for a high-potential and a low-potential class and their relevance in the electron-transfer mechanism. Guigliarelli B, et al. Eur J Biochem, 1992 Jul 1. PMID 1321049
  5. Expression of the Escherichia coli NRZ nitrate reductase is highly growth phase dependent and is controlled by RpoS, the alternative vegetative sigma factor. Chang L, et al. Mol Microbiol, 1999 Nov. PMID 10564515

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. N-terminus verified by Edman degradation on complete protein
    Title: Nitrate reductases of Escherichia coli: sequence of the second nitrate reductase and comparison with that encoded by the narGHJI operon.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables 3 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables electron transfer activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables electron transfer activity ISM
Inferred from Sequence Model
more info
 PubMed 
enables iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
  
enables iron-sulfur cluster binding ISM
Inferred from Sequence Model
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables nitrate reductase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables nitrate reductase activity IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within DNA damage response IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within anaerobic electron transport chain IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in anaerobic electron transport chain NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in anaerobic respiration IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within anaerobic respiration IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in nitrate assimilation IEA
Inferred from Electronic Annotation
more info
  
involved_in nitrate metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in nitrate metabolic process NAS
Non-traceable Author Statement
more info
 PubMed 
Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
part_of nitrate reductase complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of nitrate reductase complex IEA
Inferred from Electronic Annotation
more info
  
part_of nitrate reductase complex IPI
Inferred from Physical Interaction
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
nitrate reductase Z subunit beta
NP_415984.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1537309..1538853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415984.1 nitrate reductase Z subunit beta [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415984.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7B6L2
    Conserved Domains (1) summary
    COG1140
    Location:1 → 512
    NarY; Nitrate reductase beta subunit [Energy production and conversion, Inorganic ion transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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