U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

sapD putrescine ABC exporter ATP binding protein SapD [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946203, updated on 4-Feb-2024

Summary

Go to the top of the page Help
Gene symbol
sapD
Gene description
putrescine ABC exporter ATP binding protein SapD
Primary source
ASAP:ABE-0004342
Locus tag
b1291
See related
ECOCYC:EG12304
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1286; trkE
Summary
Overexpression causes filamentous biofilm formation. [More information is available at EcoGene: EG12304]. SapABCDF (Sensitive to antimicrobial peptides) is a member of the ATP Binding Cassette (ABC) transporter superfamily . [More information is available at EcoCyc: EG12304].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (1352636..1353628, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF559 domain-containing protein YcjD Neighboring gene putrescine ABC exporter ATP binding protein SapF Neighboring gene putrescine ABC exporter membrane protein SapC Neighboring gene putrescine ABC exporter membrane subunit SapB Neighboring gene putative periplasmic binding protein SapA Neighboring gene DUF2543 domain-containing protein YmjA

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Energy coupling to K+ uptake via the Trk system in Escherichia coli: the role of ATP. Stewart LM, et al. J Gen Microbiol, 1985 Jan. PMID 3886836
  2. Genetic analysis of potassium transport loci in Escherichia coli: evidence for three constitutive systems mediating uptake potassium. Dosch DC, et al. J Bacteriol, 1991 Jan. PMID 1987159, Free PMC Article
  3. K+ uptake by fermenting Escherichia coli cells: pH dependent mode of the TrkA system operating. Trchounian A, et al. Biosci Rep, 2000 Aug. PMID 11092250
  4. Multiple mechanisms, roles and controls of K+ transport in Escherichia coli. Epstein W, et al. Biochem Soc Trans, 1993 Nov. PMID 8131887
  5. Potassium transport loci in Escherichia coli K-12. Epstein W, et al. J Bacteriol, 1971 Nov. PMID 4942756, Free PMC Article

See all (28) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP binding IMP
Inferred from Mutant Phenotype
more info
 PubMed 
enables ATP binding ISM
Inferred from Sequence Model
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables putrescine transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
  
involved_in peptide transport IEA
Inferred from Electronic Annotation
more info
  
involved_in peptide transport NAS
Non-traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within potassium ion transmembrane transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in potassium ion transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within putrescine transport IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
Non-traceable Author Statement
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane NAS
Non-traceable Author Statement
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
putrescine ABC exporter ATP binding protein SapD

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1352636..1353628 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415807.1 putrescine ABC exporter ATP binding protein SapD [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415807.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7H9QPC1, A0A8S7K5C2, A0A8T6QBK1
    Conserved Domains (1) summary
    PRK15093
    Location:1 → 330
    PRK15093; peptide ABC transporter ATP-binding protein SapD
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.