U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

araG arabinose ABC transporter ATP binding subunit [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946408, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
araG
Gene description
arabinose ABC transporter ATP binding subunit
Primary source
ASAP:ABE-0006328
Locus tag
b1900
See related
ECOCYC:EG10058
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1898
Summary
The AraFGH arabinose transporter is a member of the ATP Binding Cassette (ABC) transporter superfamily. [More information is available at EcoCyc: EG10058].
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000913.3 (1983555..1985069, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene trehalose-6-phosphate synthase Neighboring gene trehalose-6-phosphate phosphatase Neighboring gene arabinose ABC transporter membrane subunit Neighboring gene arabinose ABC transporter periplasmic binding protein Neighboring gene putative ferritin-like protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Biochemical and physiological properties of the DNA binding domain of AraC protein. Timmes A, et al. J Mol Biol, 2004 Jul 16. PMID 15223316
  2. Escherichia coli K12 arabinose-binding protein mutants with altered transport properties. Kehres DG, et al. Protein Sci, 1992 Dec. PMID 1304895, Free PMC Article
  3. High-affinity L-arabinose transport operon. Gene product expression and mRNAs. Horazdovsky BF, et al. J Mol Biol, 1987 Sep 5. PMID 2445995
  4. Regulatable arabinose-inducible gene expression system with consistent control in all cells of a culture. Khlebnikov A, et al. J Bacteriol, 2000 Dec. PMID 11092865, Free PMC Article
  5. Regulation of the L-arabinose transport operons in Escherichia coli. Kolodrubetz D, et al. J Mol Biol, 1981 Sep 15. PMID 6461771

See all (21) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables ABC-type L-arabinose transporter activity IEA
Inferred from Electronic Annotation
more info
  
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
  
enables ATP hydrolysis activity ISM
Inferred from Sequence Model
more info
 PubMed 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-arabinose transmembrane transport NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in organic substance transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
Non-traceable Author Statement
more info
 PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane NAS
Non-traceable Author Statement
more info
 PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
arabinose ABC transporter ATP binding subunit
NP_416413.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1983555..1985069 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416413.1 arabinose ABC transporter ATP binding subunit [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416413.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B9ALN7
    Conserved Domains (1) summary
    PRK11288
    Location:4 → 504
    araG; L-arabinose ABC transporter ATP-binding protein AraG
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.