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ghrA glyoxylate/hydroxypyruvate reductase A [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946431, updated on 11-Apr-2024

Summary

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Gene symbol
ghrA
Gene description
glyoxylate/hydroxypyruvate reductase A
Primary source
ASAP:ABE-0003503
Locus tag
b1033
See related
ECOCYC:G6539
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1019; ycdW
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Genomic context

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Sequence:
NC_000913.3 (1097886..1098824)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene uncharacterized protein YcdU Neighboring gene tRNA-Ser Neighboring gene zinc-binding phosphatase YcdX Neighboring gene chaperone protein YcdY

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Biochemical characterization of the 2-ketoacid reductases encoded by ycdW and yiaE genes in Escherichia coli. Nuñez MF, et al. Biochem J, 2001 Mar 15. PMID 11237876, Free PMC Article
  2. Global responses of Escherichia coli to adverse conditions determined by microarrays and FT-IR spectroscopy. Moen B, et al. Can J Microbiol, 2009 Jun. PMID 19767843
  3. Enrichment of low abundance proteins of Escherichia coli by hydroxyapatite chromatography. Fountoulakis M, et al. Electrophoresis, 1999 Aug. PMID 10493123
  4. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article
  5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. N-terminus verified by Edman degradation on complete protein
    Title: Biochemical characterization of the 2-ketoacid reductases encoded by ycdW and yiaE genes in Escherichia coli.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
  
enables glycerate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
  
enables glyoxylate reductase (NADPH) activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables glyoxylate reductase (NADPH) activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables glyoxylate reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
  
enables hydroxypyruvate reductase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables hydroxypyruvate reductase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables hydroxypyruvate reductase activity IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
glyoxylate/hydroxypyruvate reductase A
NP_415551.2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1097886..1098824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415551.2 glyoxylate/hydroxypyruvate reductase A [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415551.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A377KAF7
    Conserved Domains (1) summary
    PRK15469
    Location:1 → 312
    ghrA; glyoxylate/hydroxypyruvate reductase GhrA
Nucleotide Protein
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