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gatB galactitol-specific PTS enzyme IIB component [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946610, updated on 2-May-2024

Summary

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Gene symbol
gatB
Gene description
galactitol-specific PTS enzyme IIB component
Primary source
ASAP:ABE-0006930
Locus tag
b2093
See related
ECOCYC:EG12415
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2086
Summary
[More information is available at EcoCyc: EG12415].
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Genomic context

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Sequence:
NC_000913.3 (2174282..2174566, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene galactitol-1-phosphate 5-dehydrogenase Neighboring gene pseudo Neighboring gene galactitol-specific PTS enzyme IIA component Neighboring gene putative tagatose-1,6-bisphosphate aldolase 2 chaperone

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. N-terminus verified by Edman degradation on complete protein
    Title: Small genes/gene-products in Escherichia coli K-12.
  2. NMR spectroscopy solution of the three-dimensional structure of the IIB subunit (GatB). An NMR titration was performed to identify the GatA-interacting residues.
    Title: NMR structure of the enzyme GatB of the galactitol-specific phosphoenolpyruvate-dependent phosphotransferase system and its interaction with GatA.
Submit: New GeneRIF Correction

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein-phosphocysteine-galactitol-phosphotransferase system transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein-phosphocysteine-sugar phosphotransferase activity RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in galactitol metabolic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within galactitol transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in galactitol transmembrane transport NAS
Non-traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within phosphoenolpyruvate-dependent sugar phosphotransferase system IDA
Inferred from Direct Assay
more info
 PubMed 
involved_in phosphoenolpyruvate-dependent sugar phosphotransferase system IEA
Inferred from Electronic Annotation
more info
  
involved_in phosphoenolpyruvate-dependent sugar phosphotransferase system NAS
Non-traceable Author Statement
more info
 PubMed 
acts_upstream_of_or_within phosphoenolpyruvate-dependent sugar phosphotransferase system RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
part_of transmembrane transporter complex NAS
Non-traceable Author Statement
more info
 PubMed 

General protein information

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Preferred Names
galactitol-specific PTS enzyme IIB component
NP_416596.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2174282..2174566 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416596.1 galactitol-specific PTS enzyme IIB component [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416596.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A7L5V612
    Conserved Domains (1) summary
    PRK10310
    Location:1 → 94
    PRK10310; PTS galactitol transporter subunit IIB
Nucleotide Protein
Heading Accession and Version

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